E-commerce11 min read

B2B E-commerce Platform: Shopify Plus vs ERP-Integrated vs Custom Build (2026)

Mohamed Bah·Fondateur, Kolonell
October 5, 2026
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B2B E-commerce Platform: Shopify Plus vs ERP-Integrated vs Custom Build (2026)

B2B E-commerce Platform: Shopify Plus vs ERP-Integrated vs Custom Build (2026)

E-commerce

The verdict in three sentences

For a distributor of technical parts or supplies in Lyon, London or Amsterdam, the right choice depends first on the quality of your ERP and the complexity of your commercial terms. Shopify Plus B2B is the fastest and cheapest to launch if your catalog stays under 20,000 SKUs and your pricing is readable, Sana Commerce wins when your ERP (Microsoft Dynamics or SAP Business One) is the absolute source of truth, and a custom build wins once quotes, backorders and multi-buyer accounts are core to the business. Over 3 years, all three options land between 96,000 and 270,000 EUR in total cost.

What a B2B distributor really needs

A maintenance buyer at an industrial plant does not order like a consumer. They enter SKUs in batches, expect their negotiated price, request a quote above a threshold, accept partial deliveries and go through internal approval. A B2B platform must cover these functions before any design question.

B2B functionShopify Plus B2BSana CommerceCustom build
Per-customer pricing and family discountsYes, company catalogsYes, read live from the ERPYes, unlimited logic
Multi-buyer accounts and rolesYes, basicYesYes, custom approval flows
Online quote requestsVia third-party appYesYes, with negotiation and versions
Backorders and partial deliveriesLimitedYes, from the ERPYes
Quick order by SKU or CSV importYesYesYes
Real-time multi-warehouse stockVia connectorNativeDepends on integration
Net 30 or net 60 payment termsYes (payment terms)YesYes
Catalog above 50,000 SKUsPossible but heavyYesYes

Three-year total cost

Entry price is often misleading. Shopify Plus starts around 2,300 USD a month on a 3-year term, plus B2B apps, the ERP connector and the agency. Sana Commerce charges an annual license tied to users and sites, but cuts integration cost sharply since it reads the ERP directly. A custom build front-loads the effort.

Item (excl. VAT, 2026 order of magnitude)Shopify Plus B2BSana CommerceCustom B2B site
Setup and integration35,000 to 70,000 EUR30,000 to 60,000 EUR60,000 to 150,000 EUR
Annual subscription or licenseAbout 26,000 EUR25,000 to 60,000 EUR0 EUR
Annual apps and connectors4,000 to 12,000 EURLargely included0 EUR
Annual hosting and maintenanceIncluded + 6,000 to 12,000 EUR agency5,000 to 10,000 EUR12,000 to 25,000 EUR
Transaction fees (Shopify Payments or gateway)0.2 to 1.6 % depending on gatewayDepends on providerDepends on provider
Three-year total cost143,000 to 220,000 EUR120,000 to 270,000 EUR96,000 to 225,000 EUR
Time to launch3 to 5 months3 to 6 months5 to 8 months

Custom looks competitive over 3 years, but it assumes a team able to keep evolving it. Shopify Plus imposes limits on checkout customization. Sana stays tied to the vendor roadmap and your ERP.

How to decide in five questions

QuestionIf yesIf no
Is your ERP Dynamics 365 BC, SAP B1 or a well-documented API-first ERP?Sana or customCustom with an integration layer
Do more than 30 % of orders go through quotes?CustomShopify Plus or Sana
Do you have over 50,000 SKUs with technical attributes?Sana or customShopify Plus is enough
Do you also target consumers (B2C)?Shopify PlusSana or custom
Do you want to launch in under 4 months?Shopify PlusAny option

Mini case study

Claire, sales director of an industrial supplies distributor in Lyon (22 M EUR revenue, 18,000 SKUs, Dynamics 365 Business Central ERP), targets 30 % of orders online within 18 months. Today, 4 sales assistants key 2,400 orders a month at 9 minutes each, or 360 hours. With Sana at a 45,000 EUR annual license and 50,000 EUR integration, 720 monthly orders move online: 108 hours freed per month, valued at 38 EUR loaded, about 49,000 EUR a year. Add 1.5 % extra revenue from 24/7 service on active accounts, or 330,000 EUR revenue and about 82,000 EUR gross margin at 25 %. Annual gain: about 131,000 EUR against a first-year cost of 95,000 EUR. Payback in about 9 months.

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FAQ

Is Shopify Plus really suited to B2B in 2026?

Yes for catalogs up to 20,000 SKUs and simple per-company pricing. Native B2B features cover company catalogs and payment terms, but complex quotes rely on apps at 300 to 1,000 USD a month.

Does Sana Commerce work with every ERP?

No, Sana is built for Microsoft Dynamics and SAP. If your ERP is a niche industry tool, a custom build with a 15,000 to 35,000 EUR integration layer fits better.

What share of orders can move online?

European distributors reach 25 to 45 % online orders after 18 to 24 months. Repeat customers move first; large accounts on EDI stay separate.

Do we need a certified Shopify Plus or Sana agency?

It is recommended for Sana, which integrates through partners. For Shopify Plus, B2B and ERP experience matters more than the badge; expect 650 to 900 EUR a day in Lyon and 700 to 1,100 GBP in London.

Can we start small?

Yes, with a customer portal offering quick order and order tracking for 30,000 to 50,000 EUR, then add quotes and backorders.

Let's scope your project. Send us your ERP, SKU count and pricing terms: we compare the three options and price a scope between 60,000 and 150,000 EUR with a 3 to 8 month timeline. Detailed quote within 48 h. WhatsApp +221 77 596 93 33.

Tags:#B2B e-commerce#Shopify Plus#Sana Commerce#custom B2B site#ERP integration#e-commerce agency#distributor
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Mohamed Bah

Fondateur, Kolonell

Passionate about digital and entrepreneurship in Africa, Mohamed has been helping Sénégalese businesses with their digital transformation since 2020. Founder of Kolonell, he believes every SME deserves a professional and accessible online présence.